dbCAN Logo

Cluster: AG501_bin.49_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_172260 k141_172260_34 38294 38830 - 4.A.1.2.6
CAZyme k141_172260 k141_172260_35 38971 40419 - GH1
TF k141_172260 k141_172260_36 40592 41599 - HTH_AraC
CAZyme k141_172260 k141_172260_37 41716 44283 + GH106
TF k141_172260 k141_172260_38 44326 45180 + HTH_6
STP k141_172260 k141_172260_39 45531 46214 - Pribosyltran
TC k141_172260 k141_172260_40 46652 49420 + 3.A.3.4.1
TF k141_172260 k141_172260_41 49487 51025 - GerE
CAZyme k141_172260 k141_172260_42 51290 52603 - GH140
TC k141_172260 k141_172260_43 52815 54242 - 4.A.1.2.11
Gene ID: k141_172260_34
Type: TC
Location: 38294 - 38830 (-)
Gene ID: k141_172260_35
Type: CAZyme
Location: 38971 - 40419 (-)
Gene ID: k141_172260_36
Type: TF
Location: 40592 - 41599 (-)
Gene ID: k141_172260_37
Type: CAZyme
Location: 41716 - 44283 (+)
Gene ID: k141_172260_38
Type: TF
Location: 44326 - 45180 (+)
Gene ID: k141_172260_39
Type: STP
Location: 45531 - 46214 (-)
Gene ID: k141_172260_40
Type: TC
Location: 46652 - 49420 (+)
Gene ID: k141_172260_41
Type: TF
Location: 49487 - 51025 (-)
Gene ID: k141_172260_42
Type: CAZyme
Location: 51290 - 52603 (-)
Gene ID: k141_172260_43
Type: TC
Location: 52815 - 54242 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_172260_41 vegetarian > omnivore 1.32959 0.01867

🧭 Explore Read Mapping of CGC

← Back to Cluster List