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Cluster: AG501_bin.49_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_122350 k141_122350_2 1730 3151 - GH1
TC k141_122350 k141_122350_3 3227 4984 - 4.A.3.1.1
TF k141_122350 k141_122350_4 5260 6270 + LacI
TC k141_122350 k141_122350_5 6606 8366 - 4.A.3.1.1
CAZyme k141_122350 k141_122350_6 8543 9655 - GH1
pfam k141_122350 k141_122350_7 9707 9985 - Glyco_hydro_1
TF k141_122350 k141_122350_8 10327 11364 + LacI
CAZyme k141_122350 k141_122350_9 11641 13080 - GH1
TC k141_122350 k141_122350_10 13147 14922 - 4.A.3.1.1
TF k141_122350 k141_122350_11 15280 16284 + LacI
TC k141_122350 k141_122350_12 16499 16837 + 4.A.3.1.2
Gene ID: k141_122350_2
Type: CAZyme
Location: 1730 - 3151 (-)
Gene ID: k141_122350_3
Type: TC
Location: 3227 - 4984 (-)
Gene ID: k141_122350_4
Type: TF
Location: 5260 - 6270 (+)
Gene ID: k141_122350_5
Type: TC
Location: 6606 - 8366 (-)
Gene ID: k141_122350_6
Type: CAZyme
Location: 8543 - 9655 (-)
Gene ID: k141_122350_7
Type: pfam
Location: 9707 - 9985 (-)
Gene ID: k141_122350_8
Type: TF
Location: 10327 - 11364 (+)
Gene ID: k141_122350_9
Type: CAZyme
Location: 11641 - 13080 (-)
Gene ID: k141_122350_10
Type: TC
Location: 13147 - 14922 (-)
Gene ID: k141_122350_11
Type: TF
Location: 15280 - 16284 (+)
Gene ID: k141_122350_12
Type: TC
Location: 16499 - 16837 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_122350_8 vegetarian > omnivore 1.04288 0.01867

🧭 Explore Read Mapping of CGC

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