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Cluster: AG491_bin.60_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_133456 k141_133456_52 55135 57162 - GH13_19
CAZyme k141_133456 k141_133456_53 57729 58301 + GH73
TF k141_133456 k141_133456_54 58341 59519 - HTH_AraC | HTH_AraC
TC k141_133456 k141_133456_55 59553 60734 - 3.A.1.2.4
TC k141_133456 k141_133456_56 60712 62253 - 3.A.1.2.4
TC k141_133456 k141_133456_57 62325 63317 - 3.A.1.2.4
NULL(UNKNOWN) k141_133456 k141_133456_58 63626 65011 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_133456 k141_133456_59 65073 66527 + FGGY_N | FGGY_C
TC k141_133456 k141_133456_60 66600 67595 - 9.B.97.1.1
Gene ID: k141_133456_52
Type: CAZyme
Location: 55135 - 57162 (-)
Gene ID: k141_133456_53
Type: CAZyme
Location: 57729 - 58301 (+)
Gene ID: k141_133456_54
Type: TF
Location: 58341 - 59519 (-)
Gene ID: k141_133456_55
Type: TC
Location: 59553 - 60734 (-)
Gene ID: k141_133456_56
Type: TC
Location: 60712 - 62253 (-)
Gene ID: k141_133456_57
Type: TC
Location: 62325 - 63317 (-)
Gene ID: k141_133456_58
Type:
Location: 63626 - 65011 (+)
Gene ID: k141_133456_59
Type: pfam
Location: 65073 - 66527 (+)
Gene ID: k141_133456_60
Type: TC
Location: 66600 - 67595 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_133456_59 vegetarian > omnivore 2.23848 0.01893
k141_133456_59 vegetarian > vegan 1.99113 0.01195

🧭 Explore Read Mapping of CGC

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