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Cluster: AG491_bin.60_CGC60

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_92755 k141_92755_61 63824 66007 + 1.B.14.1.15
pfam k141_92755 k141_92755_62 66135 68108 + PhoX
TC k141_92755 k141_92755_63 68211 69599 + 2.A.3.1.1
TF k141_92755 k141_92755_64 69677 69976 - HTH_3
pfam k141_92755 k141_92755_65 69964 70326 - Gp49
TC k141_92755 k141_92755_66 70532 71767 + 2.A.1.10.4
pfam k141_92755 k141_92755_67 71783 72808 + AP_endonuc_2
CAZyme k141_92755 k141_92755_68 72801 73943 + GH109
TF k141_92755 k141_92755_69 74019 74990 + LacI
TC k141_92755 k141_92755_70 74991 76235 - 1.A.23.4.5
TC k141_92755 k141_92755_71 76301 77602 - 2.A.1.3.38
Gene ID: k141_92755_61
Type: TC
Location: 63824 - 66007 (+)
Gene ID: k141_92755_62
Type: pfam
Location: 66135 - 68108 (+)
Gene ID: k141_92755_63
Type: TC
Location: 68211 - 69599 (+)
Gene ID: k141_92755_64
Type: TF
Location: 69677 - 69976 (-)
Gene ID: k141_92755_65
Type: pfam
Location: 69964 - 70326 (-)
Gene ID: k141_92755_66
Type: TC
Location: 70532 - 71767 (+)
Gene ID: k141_92755_67
Type: pfam
Location: 71783 - 72808 (+)
Gene ID: k141_92755_68
Type: CAZyme
Location: 72801 - 73943 (+)
Gene ID: k141_92755_69
Type: TF
Location: 74019 - 74990 (+)
Gene ID: k141_92755_70
Type: TC
Location: 74991 - 76235 (-)
Gene ID: k141_92755_71
Type: TC
Location: 76301 - 77602 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_92755_61 vegetarian > omnivore 2.24535 0.01786
k141_92755_62 vegetarian > omnivore 1.57835 0.01893
k141_92755_62 vegetarian > vegan 1.58725 0.04139
k141_92755_69 vegetarian > omnivore 1.89156 0.01893
k141_92755_70 vegan > omnivore 1.26756 0.04066
k141_92755_70 vegetarian > omnivore 1.05435 0.01893
k141_92755_71 vegetarian > omnivore 2.69008 0.01893

🧭 Explore Read Mapping of CGC

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