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Cluster: AG491_bin.60_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_47893 k141_47893_10 8852 11374 + GT51
pfam k141_47893 k141_47893_11 11709 12281 + Fimbrial
pfam k141_47893 k141_47893_12 12393 13037 + PapD_N | PapD_C
TC k141_47893 k141_47893_13 13057 15534 + 1.B.11.3.6
pfam k141_47893 k141_47893_14 15547 16551 + Fimbrial | MrkDrd
TC k141_47893 k141_47893_15 16757 19006 + 1.B.14.1.2
TC k141_47893 k141_47893_16 19057 19854 + 3.A.1.14.3
TC k141_47893 k141_47893_17 19854 20744 + 3.A.1.14.3
TC k141_47893 k141_47893_18 20741 22723 + 3.A.1.14.3
pfam k141_47893 k141_47893_19 22808 24088 - Aminotran_3
TC k141_47893 k141_47893_20 24266 25666 + 2.A.49.5.5
pfam k141_47893 k141_47893_21 25746 26090 + Fe-S_biosyn
TC k141_47893 k141_47893_22 26162 26785 - 1.A.62.2.2
TC k141_47893 k141_47893_23 26807 27607 - 3.A.1.13.1
Gene ID: k141_47893_10
Type: CAZyme
Location: 8852 - 11374 (+)
Gene ID: k141_47893_11
Type: pfam
Location: 11709 - 12281 (+)
Gene ID: k141_47893_12
Type: pfam
Location: 12393 - 13037 (+)
Gene ID: k141_47893_13
Type: TC
Location: 13057 - 15534 (+)
Gene ID: k141_47893_14
Type: pfam
Location: 15547 - 16551 (+)
Gene ID: k141_47893_15
Type: TC
Location: 16757 - 19006 (+)
Gene ID: k141_47893_16
Type: TC
Location: 19057 - 19854 (+)
Gene ID: k141_47893_17
Type: TC
Location: 19854 - 20744 (+)
Gene ID: k141_47893_18
Type: TC
Location: 20741 - 22723 (+)
Gene ID: k141_47893_19
Type: pfam
Location: 22808 - 24088 (-)
Gene ID: k141_47893_20
Type: TC
Location: 24266 - 25666 (+)
Gene ID: k141_47893_21
Type: pfam
Location: 25746 - 26090 (+)
Gene ID: k141_47893_22
Type: TC
Location: 26162 - 26785 (-)
Gene ID: k141_47893_23
Type: TC
Location: 26807 - 27607 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_47893_16 vegan > omnivore 1.55515 0.03087
k141_47893_16 vegetarian > omnivore 1.00165 0.01893
k141_47893_20 vegetarian > omnivore 1.14185 0.01893
k141_47893_20 vegetarian > vegan 1.53939 0.04139

🧭 Explore Read Mapping of CGC

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