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Cluster: AG491_bin.60_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29588 k141_29588_31 40265 41716 + AA10 | CBM73
CAZyme k141_29588 k141_29588_32 41802 44186 - GH20
TC k141_29588 k141_29588_33 44389 47097 - 3.A.3.4.1
TF k141_29588 k141_29588_34 47487 48434 + LacI
TC k141_29588 k141_29588_35 48562 49980 + 4.A.1.2.4
CAZyme k141_29588 k141_29588_36 50032 51687 + GH13_29
pfam k141_29588 k141_29588_37 51823 52569 + KdgM
TF k141_29588 k141_29588_38 52578 53237 - HTH_6
TC k141_29588 k141_29588_39 53411 54814 + 4.A.2.1.11
CAZyme k141_29588 k141_29588_40 54825 57422 + GH38
TC k141_29588 k141_29588_41 57424 57996 + 4.A.2.1.3
Gene ID: k141_29588_31
Type: CAZyme
Location: 40265 - 41716 (+)
Gene ID: k141_29588_32
Type: CAZyme
Location: 41802 - 44186 (-)
Gene ID: k141_29588_33
Type: TC
Location: 44389 - 47097 (-)
Gene ID: k141_29588_34
Type: TF
Location: 47487 - 48434 (+)
Gene ID: k141_29588_35
Type: TC
Location: 48562 - 49980 (+)
Gene ID: k141_29588_36
Type: CAZyme
Location: 50032 - 51687 (+)
Gene ID: k141_29588_37
Type: pfam
Location: 51823 - 52569 (+)
Gene ID: k141_29588_38
Type: TF
Location: 52578 - 53237 (-)
Gene ID: k141_29588_39
Type: TC
Location: 53411 - 54814 (+)
Gene ID: k141_29588_40
Type: CAZyme
Location: 54825 - 57422 (+)
Gene ID: k141_29588_41
Type: TC
Location: 57424 - 57996 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_29588_31 vegetarian > vegan 1.25894 0.04139
k141_29588_32 vegetarian > omnivore 1.09100 0.01893

🧭 Explore Read Mapping of CGC

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