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Cluster: AG491_bin.18_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14748 k141_14748_3 1210 1899 + 2.A.78.1.1
TC k141_14748 k141_14748_4 1896 2222 + 2.A.78.1.1
CAZyme k141_14748 k141_14748_5 2259 4649 - GH3
pfam k141_14748 k141_14748_6 4741 5871 - Ala_racemase_C | Ala_racemase_N
TC k141_14748 k141_14748_7 6141 6926 + 3.A.1.3.15
TC k141_14748 k141_14748_8 7036 7767 + 3.A.1.3.15
TC k141_14748 k141_14748_9 7751 8494 + 3.A.1.3.25
peptidase k141_14748 k141_14748_10 8605 9882 + M38.UNW
TF k141_14748 k141_14748_11 10003 10371 + GntR
TC k141_14748 k141_14748_12 10358 11260 + 3.A.1.147.1
Gene ID: k141_14748_3
Type: TC
Location: 1210 - 1899 (+)
Gene ID: k141_14748_4
Type: TC
Location: 1896 - 2222 (+)
Gene ID: k141_14748_5
Type: CAZyme
Location: 2259 - 4649 (-)
Gene ID: k141_14748_6
Type: pfam
Location: 4741 - 5871 (-)
Gene ID: k141_14748_7
Type: TC
Location: 6141 - 6926 (+)
Gene ID: k141_14748_8
Type: TC
Location: 7036 - 7767 (+)
Gene ID: k141_14748_9
Type: TC
Location: 7751 - 8494 (+)
Gene ID: k141_14748_10
Type: peptidase
Location: 8605 - 9882 (+)
Gene ID: k141_14748_11
Type: TF
Location: 10003 - 10371 (+)
Gene ID: k141_14748_12
Type: TC
Location: 10358 - 11260 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_14748_7 vegetarian > vegan 1.27582 0.00565
k141_14748_8 vegetarian > vegan 1.14815 0.00565

🧭 Explore Read Mapping of CGC

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