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Cluster: AG491_bin.18_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_205234 k141_205234_23 22920 23909 + 3.A.1.24.1
TC k141_205234 k141_205234_24 23914 24594 + 3.A.1.24.5
TC k141_205234 k141_205234_25 24641 25465 + 3.A.1.24.5
pfam k141_205234 k141_205234_26 25537 26388 - DUF11
TC k141_205234 k141_205234_27 26526 27602 - 3.A.1.1.16
TC k141_205234 k141_205234_28 27606 29318 - 3.A.1.20.2
TC k141_205234 k141_205234_29 29464 30627 - 3.A.1.20.3
pfam k141_205234 k141_205234_30 30889 33537 + GTP_EFTU | EFG_C | EFG_IV | NYN_YacP | EFG_III | EF-G_D2
CAZyme k141_205234 k141_205234_31 33547 34620 + CE4
TC k141_205234 k141_205234_32 34633 35253 + 1.A.62.2.1
Gene ID: k141_205234_23
Type: TC
Location: 22920 - 23909 (+)
Gene ID: k141_205234_24
Type: TC
Location: 23914 - 24594 (+)
Gene ID: k141_205234_25
Type: TC
Location: 24641 - 25465 (+)
Gene ID: k141_205234_26
Type: pfam
Location: 25537 - 26388 (-)
Gene ID: k141_205234_27
Type: TC
Location: 26526 - 27602 (-)
Gene ID: k141_205234_28
Type: TC
Location: 27606 - 29318 (-)
Gene ID: k141_205234_29
Type: TC
Location: 29464 - 30627 (-)
Gene ID: k141_205234_30
Type: pfam
Location: 30889 - 33537 (+)
Gene ID: k141_205234_31
Type: CAZyme
Location: 33547 - 34620 (+)
Gene ID: k141_205234_32
Type: TC
Location: 34633 - 35253 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_205234_31 vegetarian > vegan 1.39371 0.00565

🧭 Explore Read Mapping of CGC

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