Cluster: AG476_bin.83_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 5
- Substrate:
- Genome ID: AG476_bin.83
- CGC Family ID: CGCFAM_01159
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_314392 | k141_314392_35 | 45289 | 47001 | - | GH154 |
| CAZyme | k141_314392 | k141_314392_36 | 47004 | 48227 | - | GH28 |
| NULL(UNKNOWN) | k141_314392 | k141_314392_37 | 48334 | 49134 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_314392 | k141_314392_38 | 49147 | 50778 | - | CBM91 | GH43_11 |
| pfam | k141_314392 | k141_314392_39 | 50775 | 51632 | - | CN_hydrolase |
| CAZyme | k141_314392 | k141_314392_40 | 51727 | 52878 | - | GH88 |
| NULL(UNKNOWN) | k141_314392 | k141_314392_41 | 52859 | 53512 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_314392 | k141_314392_42 | 53591 | 54454 | - | 4.A.6.1.19 |
| TC | k141_314392 | k141_314392_43 | 54447 | 55343 | - | 4.A.6.1.22 |
| TC | k141_314392 | k141_314392_44 | 55423 | 55911 | - | 4.A.6.1.3 |
| pfam | k141_314392 | k141_314392_45 | 55956 | 56387 | - | EIIA-man |
| CAZyme | k141_314392 | k141_314392_46 | 56543 | 58351 | - | GH154 |
Gene ID: k141_314392_35
Type: CAZyme
Location: 45289 - 47001 (-)
Type: CAZyme
Location: 45289 - 47001 (-)
Gene ID: k141_314392_36
Type: CAZyme
Location: 47004 - 48227 (-)
Type: CAZyme
Location: 47004 - 48227 (-)
Gene ID: k141_314392_37
Type:
Location: 48334 - 49134 (-)
Type:
Location: 48334 - 49134 (-)
Gene ID: k141_314392_38
Type: CAZyme
Location: 49147 - 50778 (-)
Type: CAZyme
Location: 49147 - 50778 (-)
Gene ID: k141_314392_39
Type: pfam
Location: 50775 - 51632 (-)
Type: pfam
Location: 50775 - 51632 (-)
Gene ID: k141_314392_40
Type: CAZyme
Location: 51727 - 52878 (-)
Type: CAZyme
Location: 51727 - 52878 (-)
Gene ID: k141_314392_41
Type:
Location: 52859 - 53512 (-)
Type:
Location: 52859 - 53512 (-)
Gene ID: k141_314392_42
Type: TC
Location: 53591 - 54454 (-)
Type: TC
Location: 53591 - 54454 (-)
Gene ID: k141_314392_43
Type: TC
Location: 54447 - 55343 (-)
Type: TC
Location: 54447 - 55343 (-)
Gene ID: k141_314392_44
Type: TC
Location: 55423 - 55911 (-)
Type: TC
Location: 55423 - 55911 (-)
Gene ID: k141_314392_45
Type: pfam
Location: 55956 - 56387 (-)
Type: pfam
Location: 55956 - 56387 (-)
Gene ID: k141_314392_46
Type: CAZyme
Location: 56543 - 58351 (-)
Type: CAZyme
Location: 56543 - 58351 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.