Cluster: AG476_bin.83_CGC14
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: AG476_bin.83
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_90314 | k141_90314_8 | 18945 | 20189 | - | GT4 |
| pfam | k141_90314 | k141_90314_9 | 20204 | 20968 | - | BcrAD_BadFG |
| pfam | k141_90314 | k141_90314_10 | 21020 | 22183 | - | HGD-D |
| TC | k141_90314 | k141_90314_11 | 22261 | 23046 | - | 3.A.1.5.36 |
| TC | k141_90314 | k141_90314_12 | 23033 | 24031 | - | 3.A.1.5.35 |
| TC | k141_90314 | k141_90314_13 | 24035 | 24862 | - | 3.A.1.5.39 |
| TC | k141_90314 | k141_90314_14 | 24862 | 25815 | - | 3.A.1.5.11 |
| TC | k141_90314 | k141_90314_15 | 25902 | 27512 | - | 3.A.1.5.11 |
| pfam | k141_90314 | k141_90314_16 | 27697 | 28980 | - | HGD-D |
| TC | k141_90314 | k141_90314_17 | 29431 | 30501 | - | 3.A.1.1.3 |
| TC | k141_90314 | k141_90314_18 | 30505 | 31986 | - | 3.A.1.8.1 |
Gene ID: k141_90314_8
Type: CAZyme
Location: 18945 - 20189 (-)
Type: CAZyme
Location: 18945 - 20189 (-)
Gene ID: k141_90314_9
Type: pfam
Location: 20204 - 20968 (-)
Type: pfam
Location: 20204 - 20968 (-)
Gene ID: k141_90314_10
Type: pfam
Location: 21020 - 22183 (-)
Type: pfam
Location: 21020 - 22183 (-)
Gene ID: k141_90314_11
Type: TC
Location: 22261 - 23046 (-)
Type: TC
Location: 22261 - 23046 (-)
Gene ID: k141_90314_12
Type: TC
Location: 23033 - 24031 (-)
Type: TC
Location: 23033 - 24031 (-)
Gene ID: k141_90314_13
Type: TC
Location: 24035 - 24862 (-)
Type: TC
Location: 24035 - 24862 (-)
Gene ID: k141_90314_14
Type: TC
Location: 24862 - 25815 (-)
Type: TC
Location: 24862 - 25815 (-)
Gene ID: k141_90314_15
Type: TC
Location: 25902 - 27512 (-)
Type: TC
Location: 25902 - 27512 (-)
Gene ID: k141_90314_16
Type: pfam
Location: 27697 - 28980 (-)
Type: pfam
Location: 27697 - 28980 (-)
Gene ID: k141_90314_17
Type: TC
Location: 29431 - 30501 (-)
Type: TC
Location: 29431 - 30501 (-)
Gene ID: k141_90314_18
Type: TC
Location: 30505 - 31986 (-)
Type: TC
Location: 30505 - 31986 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_90314_11 | vegan > omnivore | 2.30164 | 0.01287 |
| k141_90314_13 | vegan > omnivore | 2.37325 | 0.01287 |
| k141_90314_14 | vegan > omnivore | 2.15336 | 0.01287 |
| k141_90314_15 | vegan > omnivore | 2.57309 | 0.01287 |