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Cluster: AG473_9_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_156944 k141_156944_56 68703 70439 - GH13_44
CAZyme k141_156944 k141_156944_57 70497 72599 - GH97
TC k141_156944 k141_156944_58 72647 74374 - 8.A.46.1.1
pfam k141_156944 k141_156944_59 74446 76332 - TonB_dep_Rec_b-barrel
TC k141_156944 k141_156944_60 76277 77422 - 1.B.14.6.1
pfam k141_156944 k141_156944_61 77650 79287 + DUF6377
CAZyme k141_156944 k141_156944_62 79317 81578 + GH3
CAZyme k141_156944 k141_156944_63 81584 83968 + GH3
Gene ID: k141_156944_56
Type: CAZyme
Location: 68703 - 70439 (-)
Gene ID: k141_156944_57
Type: CAZyme
Location: 70497 - 72599 (-)
Gene ID: k141_156944_58
Type: TC
Location: 72647 - 74374 (-)
Gene ID: k141_156944_59
Type: pfam
Location: 74446 - 76332 (-)
Gene ID: k141_156944_60
Type: TC
Location: 76277 - 77422 (-)
Gene ID: k141_156944_61
Type: pfam
Location: 77650 - 79287 (+)
Gene ID: k141_156944_62
Type: CAZyme
Location: 79317 - 81578 (+)
Gene ID: k141_156944_63
Type: CAZyme
Location: 81584 - 83968 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_156944_60 vegetarian > vegan 1.30480 0.00245

🧭 Explore Read Mapping of CGC

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