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Cluster: AG473_9_CGC48

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_87951 k141_87951_10 16451 19633 - 1.B.14.6.1
CAZyme k141_87951 k141_87951_11 19952 22282 - CBM57 | GH2
NULL(UNKNOWN) k141_87951 k141_87951_12 22472 22570 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_87951 k141_87951_13 22872 24314 + 2.A.25.1.5
TC k141_87951 k141_87951_14 24559 26928 + 1.B.14.8.7
pfam k141_87951 k141_87951_15 27303 27890 + dTDP_sugar_isom
NULL(UNKNOWN) k141_87951 k141_87951_16 28184 28273 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_87951 k141_87951_17 28693 30177 - CE8
Gene ID: k141_87951_10
Type: TC
Location: 16451 - 19633 (-)
Gene ID: k141_87951_11
Type: CAZyme
Location: 19952 - 22282 (-)
Gene ID: k141_87951_12
Type:
Location: 22472 - 22570 (-)
Gene ID: k141_87951_13
Type: TC
Location: 22872 - 24314 (+)
Gene ID: k141_87951_14
Type: TC
Location: 24559 - 26928 (+)
Gene ID: k141_87951_15
Type: pfam
Location: 27303 - 27890 (+)
Gene ID: k141_87951_16
Type:
Location: 28184 - 28273 (+)
Gene ID: k141_87951_17
Type: CAZyme
Location: 28693 - 30177 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_87951_11 vegetarian > vegan 1.16105 0.00245
k141_87951_12 vegetarian > vegan 13.50768 0.00245
k141_87951_14 vegetarian > vegan 3.18652 0.00245
k141_87951_15 vegetarian > omnivore 3.70647 0.01364
k141_87951_15 vegetarian > vegan 5.41752 0.00245
k141_87951_16 vegetarian > vegan 1.17270 0.00245
k141_87951_17 vegetarian > omnivore 1.38595 0.01364
k141_87951_17 vegetarian > vegan 7.10094 0.00245

🧭 Explore Read Mapping of CGC

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