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Cluster: AG473_9_CGC46

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_156054 k141_156054_30 43156 43902 + 1.B.44.1.2
CAZyme k141_156054 k141_156054_31 43994 46147 - CBM91 | GH43_10
CAZyme k141_156054 k141_156054_32 46288 48750 - GH95
CAZyme k141_156054 k141_156054_33 48819 51779 - CBM6 | CBM91 | GH43_10 | GH43_29
CAZyme k141_156054 k141_156054_34 51955 54339 - GH146
CAZyme k141_156054 k141_156054_35 54440 55771 - CBM6 | GH43_29
Gene ID: k141_156054_30
Type: TC
Location: 43156 - 43902 (+)
Gene ID: k141_156054_31
Type: CAZyme
Location: 43994 - 46147 (-)
Gene ID: k141_156054_32
Type: CAZyme
Location: 46288 - 48750 (-)
Gene ID: k141_156054_33
Type: CAZyme
Location: 48819 - 51779 (-)
Gene ID: k141_156054_34
Type: CAZyme
Location: 51955 - 54339 (-)
Gene ID: k141_156054_35
Type: CAZyme
Location: 54440 - 55771 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_156054_30 vegetarian > vegan 1.77029 0.00245

🧭 Explore Read Mapping of CGC

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