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Cluster: AG473_9_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_159636 k141_159636_1 1236 1943 - 3.A.1.124.5
pfam k141_159636 k141_159636_2 2101 3501 - DUF5687
CAZyme k141_159636 k141_159636_3 3745 4701 - GH43_1
CAZyme k141_159636 k141_159636_4 4722 5843 - GH10
TC k141_159636 k141_159636_5 5920 7353 - 2.A.2.3.2
pfam k141_159636 k141_159636_6 7420 8592 - Lipase_GDSL | Lipase_GDSL_2
TF k141_159636 k141_159636_7 8869 12786 + HTH_AraC
CAZyme k141_159636 k141_159636_8 12870 14876 + GH67
CAZyme k141_159636 k141_159636_9 14869 16515 + GH35
NULL(UNKNOWN) k141_159636 k141_159636_10 16533 16682 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_159636 k141_159636_11 16765 19854 + 1.B.14.6.1
Gene ID: k141_159636_1
Type: TC
Location: 1236 - 1943 (-)
Gene ID: k141_159636_2
Type: pfam
Location: 2101 - 3501 (-)
Gene ID: k141_159636_3
Type: CAZyme
Location: 3745 - 4701 (-)
Gene ID: k141_159636_4
Type: CAZyme
Location: 4722 - 5843 (-)
Gene ID: k141_159636_5
Type: TC
Location: 5920 - 7353 (-)
Gene ID: k141_159636_6
Type: pfam
Location: 7420 - 8592 (-)
Gene ID: k141_159636_7
Type: TF
Location: 8869 - 12786 (+)
Gene ID: k141_159636_8
Type: CAZyme
Location: 12870 - 14876 (+)
Gene ID: k141_159636_9
Type: CAZyme
Location: 14869 - 16515 (+)
Gene ID: k141_159636_10
Type:
Location: 16533 - 16682 (+)
Gene ID: k141_159636_11
Type: TC
Location: 16765 - 19854 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_159636_10 vegetarian > vegan 2.62076 0.00245

🧭 Explore Read Mapping of CGC

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