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Cluster: AG473_9_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_150250 k141_150250_48 80314 83403 - 1.B.14.6.1
TF k141_150250 k141_150250_49 83716 84717 + LacI
TC k141_150250 k141_150250_50 84737 86098 + 2.A.2.6.2
CAZyme k141_150250 k141_150250_51 86231 88906 + GH77
CAZyme k141_150250 k141_150250_52 89100 91235 + GH97
CAZyme k141_150250 k141_150250_53 91357 93327 + GH13_14
CAZyme k141_150250 k141_150250_54 93380 95305 + GH13_46
Gene ID: k141_150250_48
Type: TC
Location: 80314 - 83403 (-)
Gene ID: k141_150250_49
Type: TF
Location: 83716 - 84717 (+)
Gene ID: k141_150250_50
Type: TC
Location: 84737 - 86098 (+)
Gene ID: k141_150250_51
Type: CAZyme
Location: 86231 - 88906 (+)
Gene ID: k141_150250_52
Type: CAZyme
Location: 89100 - 91235 (+)
Gene ID: k141_150250_53
Type: CAZyme
Location: 91357 - 93327 (+)
Gene ID: k141_150250_54
Type: CAZyme
Location: 93380 - 95305 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_150250_48 vegetarian > vegan 1.01899 0.00245

🧭 Explore Read Mapping of CGC

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