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Cluster: AG473_9_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_37776 k141_37776_5 2586 4943 - GH3
pfam k141_37776 k141_37776_6 5528 6529 + Fic | Virulence_RhuM
pfam k141_37776 k141_37776_7 6790 7560 - Ubie_methyltran | Methyltransf_4 | Methyltransf_25 | Methyltransf_31
TC k141_37776 k141_37776_8 7699 10335 - 1.C.105.2.12
Gene ID: k141_37776_5
Type: CAZyme
Location: 2586 - 4943 (-)
Gene ID: k141_37776_6
Type: pfam
Location: 5528 - 6529 (+)
Gene ID: k141_37776_7
Type: pfam
Location: 6790 - 7560 (-)
Gene ID: k141_37776_8
Type: TC
Location: 7699 - 10335 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_37776_6 vegetarian > omnivore 1.36029 0.01287

🧭 Explore Read Mapping of CGC

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