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Cluster: AG473_9_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_93468 k141_93468_42 55214 58411 + 1.B.14.6.1
pfam k141_93468 k141_93468_43 58450 60486 + SusD_RagB | SusD-like_3
TC k141_93468 k141_93468_44 60555 63380 + 1.B.14.6.1
pfam k141_93468 k141_93468_45 63402 65180 + SusD_RagB | SusD-like_3
TF k141_93468 k141_93468_46 65261 69598 - HTH_AraC
CAZyme k141_93468 k141_93468_47 70163 72274 + PL11_1
CAZyme k141_93468 k141_93468_48 72364 73980 + CE12 | CE12
pfam k141_93468 k141_93468_49 74027 77035 + DUF4450
CAZyme k141_93468 k141_93468_50 77070 78326 + CE12
CAZyme k141_93468 k141_93468_51 78394 80862 + GH2
Gene ID: k141_93468_42
Type: TC
Location: 55214 - 58411 (+)
Gene ID: k141_93468_43
Type: pfam
Location: 58450 - 60486 (+)
Gene ID: k141_93468_44
Type: TC
Location: 60555 - 63380 (+)
Gene ID: k141_93468_45
Type: pfam
Location: 63402 - 65180 (+)
Gene ID: k141_93468_46
Type: TF
Location: 65261 - 69598 (-)
Gene ID: k141_93468_47
Type: CAZyme
Location: 70163 - 72274 (+)
Gene ID: k141_93468_48
Type: CAZyme
Location: 72364 - 73980 (+)
Gene ID: k141_93468_49
Type: pfam
Location: 74027 - 77035 (+)
Gene ID: k141_93468_50
Type: CAZyme
Location: 77070 - 78326 (+)
Gene ID: k141_93468_51
Type: CAZyme
Location: 78394 - 80862 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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