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Cluster: AG473_9_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_93468 k141_93468_18 16060 16809 - 3.A.1.122.2
CAZyme k141_93468 k141_93468_19 16972 18363 - GH28
CAZyme k141_93468 k141_93468_20 18488 19615 - GH105
CAZyme k141_93468 k141_93468_21 19643 22219 - GH106
CAZyme k141_93468 k141_93468_22 22419 23366 - CE4
pfam k141_93468 k141_93468_23 23371 24246 - SASA
pfam k141_93468 k141_93468_24 24367 25959 - SusD_RagB | SusD-like_3
TC k141_93468 k141_93468_25 25975 29103 - 1.B.14.6.1
pfam k141_93468 k141_93468_26 29107 29949 - LRR_5 | LRR_5
CAZyme k141_93468 k141_93468_27 29996 31270 - CE12
CAZyme k141_93468 k141_93468_28 31410 32801 - PL9_1
CAZyme k141_93468 k141_93468_29 32807 34963 - CE12 | PL9_1
Gene ID: k141_93468_18
Type: TC
Location: 16060 - 16809 (-)
Gene ID: k141_93468_19
Type: CAZyme
Location: 16972 - 18363 (-)
Gene ID: k141_93468_20
Type: CAZyme
Location: 18488 - 19615 (-)
Gene ID: k141_93468_21
Type: CAZyme
Location: 19643 - 22219 (-)
Gene ID: k141_93468_22
Type: CAZyme
Location: 22419 - 23366 (-)
Gene ID: k141_93468_23
Type: pfam
Location: 23371 - 24246 (-)
Gene ID: k141_93468_24
Type: pfam
Location: 24367 - 25959 (-)
Gene ID: k141_93468_25
Type: TC
Location: 25975 - 29103 (-)
Gene ID: k141_93468_26
Type: pfam
Location: 29107 - 29949 (-)
Gene ID: k141_93468_27
Type: CAZyme
Location: 29996 - 31270 (-)
Gene ID: k141_93468_28
Type: CAZyme
Location: 31410 - 32801 (-)
Gene ID: k141_93468_29
Type: CAZyme
Location: 32807 - 34963 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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