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Cluster: AG473_9_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40985 k141_40985_8 5108 7144 + GH20
pfam k141_40985 k141_40985_9 7397 9001 + Phosphodiest
NULL(UNKNOWN) k141_40985 k141_40985_10 9051 9164 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_40985 k141_40985_11 9161 10339 + GT1
sulfatase k141_40985 k141_40985_12 10278 11264 + S1_20
CAZyme k141_40985 k141_40985_13 11337 12521 + GT4
pfam k141_40985 k141_40985_14 12592 13596 + LPG_synthase_TM
pfam k141_40985 k141_40985_15 13586 14626 - OprB
TC k141_40985 k141_40985_16 15193 17568 - 3.A.3.4.1
Gene ID: k141_40985_8
Type: CAZyme
Location: 5108 - 7144 (+)
Gene ID: k141_40985_9
Type: pfam
Location: 7397 - 9001 (+)
Gene ID: k141_40985_10
Type:
Location: 9051 - 9164 (+)
Gene ID: k141_40985_11
Type: CAZyme
Location: 9161 - 10339 (+)
Gene ID: k141_40985_12
Type: sulfatase
Location: 10278 - 11264 (+)
Gene ID: k141_40985_13
Type: CAZyme
Location: 11337 - 12521 (+)
Gene ID: k141_40985_14
Type: pfam
Location: 12592 - 13596 (+)
Gene ID: k141_40985_15
Type: pfam
Location: 13586 - 14626 (-)
Gene ID: k141_40985_16
Type: TC
Location: 15193 - 17568 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_40985_10 vegetarian > vegan 1.76239 0.00245
k141_40985_11 vegetarian > vegan 1.93245 0.00245
k141_40985_12 vegetarian > vegan 1.84384 0.00245

🧭 Explore Read Mapping of CGC

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