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Cluster: AG473_9_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_116922 k141_116922_100 124519 125787 + 2.A.1.14.25
pfam k141_116922 k141_116922_101 125870 126787 + DHDPS
pfam k141_116922 k141_116922_102 126813 128000 + GlcNAc_2-epim
CAZyme k141_116922 k141_116922_103 128021 129298 + GH33
pfam k141_116922 k141_116922_104 129330 129725 + fn3
TC k141_116922 k141_116922_105 129765 133148 + 1.B.14.6.1
TC k141_116922 k141_116922_106 133187 134989 + 8.A.46.1.4
CAZyme k141_116922 k141_116922_107 135428 137293 + GH20
CAZyme k141_116922 k141_116922_108 137614 140751 + CE20
pfam k141_116922 k141_116922_109 141022 141378 + P-II
TC k141_116922 k141_116922_110 141570 142832 + 1.A.11.2.7
NULL(UNKNOWN) k141_116922 k141_116922_111 142930 143670 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_116922 k141_116922_112 144358 145842 - GH125
CAZyme k141_116922 k141_116922_113 145871 148018 - GH92
Gene ID: k141_116922_100
Type: TC
Location: 124519 - 125787 (+)
Gene ID: k141_116922_101
Type: pfam
Location: 125870 - 126787 (+)
Gene ID: k141_116922_102
Type: pfam
Location: 126813 - 128000 (+)
Gene ID: k141_116922_103
Type: CAZyme
Location: 128021 - 129298 (+)
Gene ID: k141_116922_104
Type: pfam
Location: 129330 - 129725 (+)
Gene ID: k141_116922_105
Type: TC
Location: 129765 - 133148 (+)
Gene ID: k141_116922_106
Type: TC
Location: 133187 - 134989 (+)
Gene ID: k141_116922_107
Type: CAZyme
Location: 135428 - 137293 (+)
Gene ID: k141_116922_108
Type: CAZyme
Location: 137614 - 140751 (+)
Gene ID: k141_116922_109
Type: pfam
Location: 141022 - 141378 (+)
Gene ID: k141_116922_110
Type: TC
Location: 141570 - 142832 (+)
Gene ID: k141_116922_111
Type:
Location: 142930 - 143670 (+)
Gene ID: k141_116922_112
Type: CAZyme
Location: 144358 - 145842 (-)
Gene ID: k141_116922_113
Type: CAZyme
Location: 145871 - 148018 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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