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Cluster: AG471_bin.41_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_85655 k141_85655_17 20546 21784 - 2.A.23.1.2
pfam k141_85655 k141_85655_18 22006 22839 + WYL
CAZyme k141_85655 k141_85655_19 22973 24052 + CE4
CAZyme k141_85655 k141_85655_20 24084 24866 + GT2
CAZyme k141_85655 k141_85655_21 24838 25857 + GT9
CAZyme k141_85655 k141_85655_22 25871 26890 + GT9
pfam k141_85655 k141_85655_23 26883 27578 + WaaY
CAZyme k141_85655 k141_85655_24 27587 28597 + GT9
Gene ID: k141_85655_17
Type: TC
Location: 20546 - 21784 (-)
Gene ID: k141_85655_18
Type: pfam
Location: 22006 - 22839 (+)
Gene ID: k141_85655_19
Type: CAZyme
Location: 22973 - 24052 (+)
Gene ID: k141_85655_20
Type: CAZyme
Location: 24084 - 24866 (+)
Gene ID: k141_85655_21
Type: CAZyme
Location: 24838 - 25857 (+)
Gene ID: k141_85655_22
Type: CAZyme
Location: 25871 - 26890 (+)
Gene ID: k141_85655_23
Type: pfam
Location: 26883 - 27578 (+)
Gene ID: k141_85655_24
Type: CAZyme
Location: 27587 - 28597 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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