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Cluster: AG462_bin.101_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_20774 k141_20774_22 24832 25170 - 4.A.3.1.2
TF k141_20774 k141_20774_23 25384 26388 - LacI
TC k141_20774 k141_20774_24 26745 28520 + 4.A.3.1.1
CAZyme k141_20774 k141_20774_25 28587 30026 + GH1
TF k141_20774 k141_20774_26 30288 31325 - LacI
CAZyme k141_20774 k141_20774_27 31667 33109 + GH1
TC k141_20774 k141_20774_28 33286 35046 + 4.A.3.1.1
TF k141_20774 k141_20774_29 35380 36390 - LacI
TC k141_20774 k141_20774_30 36665 38443 + 4.A.3.1.1
Gene ID: k141_20774_22
Type: TC
Location: 24832 - 25170 (-)
Gene ID: k141_20774_23
Type: TF
Location: 25384 - 26388 (-)
Gene ID: k141_20774_24
Type: TC
Location: 26745 - 28520 (+)
Gene ID: k141_20774_25
Type: CAZyme
Location: 28587 - 30026 (+)
Gene ID: k141_20774_26
Type: TF
Location: 30288 - 31325 (-)
Gene ID: k141_20774_27
Type: CAZyme
Location: 31667 - 33109 (+)
Gene ID: k141_20774_28
Type: TC
Location: 33286 - 35046 (+)
Gene ID: k141_20774_29
Type: TF
Location: 35380 - 36390 (-)
Gene ID: k141_20774_30
Type: TC
Location: 36665 - 38443 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_20774_26 vegetarian > omnivore 1.03136 0.02242

🧭 Explore Read Mapping of CGC

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