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Cluster: AG462_bin.101_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_328115 k141_328115_11 9805 10974 - CE9
STP k141_328115 k141_328115_12 11094 12260 - SIS | SIS
TF k141_328115 k141_328115_13 12375 13106 - GntR
TC k141_328115 k141_328115_14 13292 14374 - 4.A.6.1.4
TC k141_328115 k141_328115_15 14364 15164 - 4.A.6.1.4
TC k141_328115 k141_328115_16 15255 15737 - 4.A.6.1.4
pfam k141_328115 k141_328115_17 15774 16055 - YajC
TC k141_328115 k141_328115_18 16055 16498 - 4.A.6.1.16
Gene ID: k141_328115_11
Type: CAZyme
Location: 9805 - 10974 (-)
Gene ID: k141_328115_12
Type: STP
Location: 11094 - 12260 (-)
Gene ID: k141_328115_13
Type: TF
Location: 12375 - 13106 (-)
Gene ID: k141_328115_14
Type: TC
Location: 13292 - 14374 (-)
Gene ID: k141_328115_15
Type: TC
Location: 14364 - 15164 (-)
Gene ID: k141_328115_16
Type: TC
Location: 15255 - 15737 (-)
Gene ID: k141_328115_17
Type: pfam
Location: 15774 - 16055 (-)
Gene ID: k141_328115_18
Type: TC
Location: 16055 - 16498 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_328115_17 vegan > omnivore 1.05017 0.00229

🧭 Explore Read Mapping of CGC

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