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Cluster: AG451_56_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_328194 k141_328194_4 2237 3727 - 2.A.35.2.1
pfam k141_328194 k141_328194_5 4070 5887 - WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep | WG_beta_rep
TC k141_328194 k141_328194_6 6334 7254 - 2.A.7.3.31
TC k141_328194 k141_328194_7 7331 8236 - 2.A.7.3.12
NULL(UNKNOWN) k141_328194 k141_328194_8 8474 9010 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_328194 k141_328194_9 9137 10510 - 2.A.22.5.3
pfam k141_328194 k141_328194_10 10784 11947 - ANF_receptor | Peripla_BP_5 | Peripla_BP_6
CAZyme k141_328194 k141_328194_11 12522 14360 - CE4
CAZyme k141_328194 k141_328194_12 14757 15743 - GH18
NULL(UNKNOWN) k141_328194 k141_328194_13 16284 18149 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_328194 k141_328194_14 18146 19996 - GT2
Gene ID: k141_328194_4
Type: TC
Location: 2237 - 3727 (-)
Gene ID: k141_328194_5
Type: pfam
Location: 4070 - 5887 (-)
Gene ID: k141_328194_6
Type: TC
Location: 6334 - 7254 (-)
Gene ID: k141_328194_7
Type: TC
Location: 7331 - 8236 (-)
Gene ID: k141_328194_8
Type:
Location: 8474 - 9010 (+)
Gene ID: k141_328194_9
Type: TC
Location: 9137 - 10510 (-)
Gene ID: k141_328194_10
Type: pfam
Location: 10784 - 11947 (-)
Gene ID: k141_328194_11
Type: CAZyme
Location: 12522 - 14360 (-)
Gene ID: k141_328194_12
Type: CAZyme
Location: 14757 - 15743 (-)
Gene ID: k141_328194_13
Type:
Location: 16284 - 18149 (-)
Gene ID: k141_328194_14
Type: CAZyme
Location: 18146 - 19996 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_328194_10 vegetarian > omnivore 1.25324 0.01613

🧭 Explore Read Mapping of CGC

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