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Cluster: AG448_15_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_41577 k141_41577_6 7495 8340 + 3.A.1.3.20
TC k141_41577 k141_41577_7 8443 9249 + 3.A.1.3.20
TC k141_41577 k141_41577_8 9249 9989 + 3.A.1.3.20
pfam k141_41577 k141_41577_9 10179 10682 - CarD_TRCF_RID | CarD_C
pfam k141_41577 k141_41577_10 10904 11080 - DUF6472
CAZyme k141_41577 k141_41577_11 11083 14151 - GH2
STP k141_41577 k141_41577_12 14843 15817 - HD
CAZyme k141_41577 k141_41577_13 15807 18053 - GH36
Gene ID: k141_41577_6
Type: TC
Location: 7495 - 8340 (+)
Gene ID: k141_41577_7
Type: TC
Location: 8443 - 9249 (+)
Gene ID: k141_41577_8
Type: TC
Location: 9249 - 9989 (+)
Gene ID: k141_41577_9
Type: pfam
Location: 10179 - 10682 (-)
Gene ID: k141_41577_10
Type: pfam
Location: 10904 - 11080 (-)
Gene ID: k141_41577_11
Type: CAZyme
Location: 11083 - 14151 (-)
Gene ID: k141_41577_12
Type: STP
Location: 14843 - 15817 (-)
Gene ID: k141_41577_13
Type: CAZyme
Location: 15807 - 18053 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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