dbCAN Logo

Cluster: AG448_15_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_179844 k141_179844_6 4851 7373 - 4.C.1.1.7
pfam k141_179844 k141_179844_7 7377 8762 - HMGL-like | LeuA_dimer
TC k141_179844 k141_179844_8 9164 10216 - 9.A.23.1.1
pfam k141_179844 k141_179844_9 10534 10953 - RuvX
pfam k141_179844 k141_179844_10 10981 11640 - His_Phos_1
CAZyme k141_179844 k141_179844_11 12007 13881 - GH173
NULL(UNKNOWN) k141_179844 k141_179844_12 13911 15794 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_179844 k141_179844_13 15816 17702 - GH173
CAZyme k141_179844 k141_179844_14 17809 19767 - GH173
Gene ID: k141_179844_6
Type: TC
Location: 4851 - 7373 (-)
Gene ID: k141_179844_7
Type: pfam
Location: 7377 - 8762 (-)
Gene ID: k141_179844_8
Type: TC
Location: 9164 - 10216 (-)
Gene ID: k141_179844_9
Type: pfam
Location: 10534 - 10953 (-)
Gene ID: k141_179844_10
Type: pfam
Location: 10981 - 11640 (-)
Gene ID: k141_179844_11
Type: CAZyme
Location: 12007 - 13881 (-)
Gene ID: k141_179844_12
Type:
Location: 13911 - 15794 (-)
Gene ID: k141_179844_13
Type: CAZyme
Location: 15816 - 17702 (-)
Gene ID: k141_179844_14
Type: CAZyme
Location: 17809 - 19767 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List