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Cluster: AG448_15_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_216714 k141_216714_8 7592 9739 - GH35
CAZyme k141_216714 k141_216714_9 9765 11165 - GH39
TF k141_216714 k141_216714_10 11317 12099 + HTH_AraC | HTH_AraC
pfam k141_216714 k141_216714_11 12277 12840 + G3P_antiterm
TC k141_216714 k141_216714_12 12969 13619 + 9.B.20.1.4
Gene ID: k141_216714_8
Type: CAZyme
Location: 7592 - 9739 (-)
Gene ID: k141_216714_9
Type: CAZyme
Location: 9765 - 11165 (-)
Gene ID: k141_216714_10
Type: TF
Location: 11317 - 12099 (+)
Gene ID: k141_216714_11
Type: pfam
Location: 12277 - 12840 (+)
Gene ID: k141_216714_12
Type: TC
Location: 12969 - 13619 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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