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Cluster: AG447_bin.44_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_26822 k141_26822_116 120986 122407 - GH1
TC k141_26822 k141_26822_117 122483 124261 - 4.A.3.1.1
TF k141_26822 k141_26822_118 124537 125547 + LacI
TC k141_26822 k141_26822_119 125882 127642 - 4.A.3.1.1
CAZyme k141_26822 k141_26822_120 127819 129261 - GH1
TF k141_26822 k141_26822_121 129603 130640 + LacI
CAZyme k141_26822 k141_26822_122 130918 132357 - GH1
TC k141_26822 k141_26822_123 132554 134329 - 4.A.3.1.1
Gene ID: k141_26822_116
Type: CAZyme
Location: 120986 - 122407 (-)
Gene ID: k141_26822_117
Type: TC
Location: 122483 - 124261 (-)
Gene ID: k141_26822_118
Type: TF
Location: 124537 - 125547 (+)
Gene ID: k141_26822_119
Type: TC
Location: 125882 - 127642 (-)
Gene ID: k141_26822_120
Type: CAZyme
Location: 127819 - 129261 (-)
Gene ID: k141_26822_121
Type: TF
Location: 129603 - 130640 (+)
Gene ID: k141_26822_122
Type: CAZyme
Location: 130918 - 132357 (-)
Gene ID: k141_26822_123
Type: TC
Location: 132554 - 134329 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_26822_121 vegetarian > omnivore 1.11051 0.01276

🧭 Explore Read Mapping of CGC

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