Cluster: AG447_bin.44_CGC14
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: AG447_bin.44
- CGC Family ID: CGCFAM_00019
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_24817 | k141_24817_4 | 2454 | 3830 | - | 3.A.1.17.10 |
| NULL(UNKNOWN) | k141_24817 | k141_24817_5 | 3834 | 4889 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_24817 | k141_24817_6 | 4892 | 6703 | - | 3.D.1.5.1 |
| STP | k141_24817 | k141_24817_7 | 6697 | 8529 | - | Pyr_redox_2 |
| CAZyme | k141_24817 | k141_24817_8 | 8787 | 10169 | - | GH4 |
| TC | k141_24817 | k141_24817_9 | 10173 | 11789 | - | 4.A.1.1.3 |
| pfam | k141_24817 | k141_24817_10 | 11889 | 12743 | - | PRD | PRD | CAT_RBD |
| TC | k141_24817 | k141_24817_11 | 12762 | 13274 | - | 4.A.1.2.5 |
Gene ID: k141_24817_4
Type: TC
Location: 2454 - 3830 (-)
Type: TC
Location: 2454 - 3830 (-)
Gene ID: k141_24817_5
Type:
Location: 3834 - 4889 (-)
Type:
Location: 3834 - 4889 (-)
Gene ID: k141_24817_6
Type: TC
Location: 4892 - 6703 (-)
Type: TC
Location: 4892 - 6703 (-)
Gene ID: k141_24817_7
Type: STP
Location: 6697 - 8529 (-)
Type: STP
Location: 6697 - 8529 (-)
Gene ID: k141_24817_8
Type: CAZyme
Location: 8787 - 10169 (-)
Type: CAZyme
Location: 8787 - 10169 (-)
Gene ID: k141_24817_9
Type: TC
Location: 10173 - 11789 (-)
Type: TC
Location: 10173 - 11789 (-)
Gene ID: k141_24817_10
Type: pfam
Location: 11889 - 12743 (-)
Type: pfam
Location: 11889 - 12743 (-)
Gene ID: k141_24817_11
Type: TC
Location: 12762 - 13274 (-)
Type: TC
Location: 12762 - 13274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.