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Cluster: AG445_bin.49_CGC72

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_35048 k141_35048_25 38503 42063 + GH167
TC k141_35048 k141_35048_26 42084 43076 - 3.A.1.2.15
TC k141_35048 k141_35048_27 43096 44607 - 3.A.1.2.20
STP k141_35048 k141_35048_28 44609 45589 - Peripla_BP_1
pfam k141_35048 k141_35048_29 45799 46608 - Kdo
CAZyme k141_35048 k141_35048_30 46601 47728 - GT4
CAZyme k141_35048 k141_35048_31 47725 48513 - GT2
pfam k141_35048 k141_35048_32 48632 49630 - Metallophos
CAZyme k141_35048 k141_35048_33 49739 53020 - GH148 | GH148
Gene ID: k141_35048_25
Type: CAZyme
Location: 38503 - 42063 (+)
Gene ID: k141_35048_26
Type: TC
Location: 42084 - 43076 (-)
Gene ID: k141_35048_27
Type: TC
Location: 43096 - 44607 (-)
Gene ID: k141_35048_28
Type: STP
Location: 44609 - 45589 (-)
Gene ID: k141_35048_29
Type: pfam
Location: 45799 - 46608 (-)
Gene ID: k141_35048_30
Type: CAZyme
Location: 46601 - 47728 (-)
Gene ID: k141_35048_31
Type: CAZyme
Location: 47725 - 48513 (-)
Gene ID: k141_35048_32
Type: pfam
Location: 48632 - 49630 (-)
Gene ID: k141_35048_33
Type: CAZyme
Location: 49739 - 53020 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_35048_29 vegan > omnivore 2.74427 0.02730

🧭 Explore Read Mapping of CGC

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