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Cluster: AG445_bin.49_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_54946 k141_54946_13 14333 16588 + GH39
TF k141_54946 k141_54946_14 16650 17765 + GntR
pfam k141_54946 k141_54946_15 17784 19691 - CN_hydrolase | NAD_synthase
TC k141_54946 k141_54946_16 19715 21127 - 2.A.8.1.12
pfam k141_54946 k141_54946_17 21276 22061 - AP_endonuc_2
CAZyme k141_54946 k141_54946_18 22080 23138 - GH109
TC k141_54946 k141_54946_19 23493 24506 - 2.A.98.1.4
TF k141_54946 k141_54946_20 24642 25535 + HTH_1
pfam k141_54946 k141_54946_21 25854 28028 - PDZ_6
TC k141_54946 k141_54946_22 28033 29391 - 9.B.160.1.10
pfam k141_54946 k141_54946_23 29552 30826 + FAD_binding_2 | DAO | FAD_oxidored | NAD_binding_8
STP k141_54946 k141_54946_24 31066 31758 - SBP_bac_10
CAZyme k141_54946 k141_54946_25 31783 34554 - GH148
Gene ID: k141_54946_13
Type: CAZyme
Location: 14333 - 16588 (+)
Gene ID: k141_54946_14
Type: TF
Location: 16650 - 17765 (+)
Gene ID: k141_54946_15
Type: pfam
Location: 17784 - 19691 (-)
Gene ID: k141_54946_16
Type: TC
Location: 19715 - 21127 (-)
Gene ID: k141_54946_17
Type: pfam
Location: 21276 - 22061 (-)
Gene ID: k141_54946_18
Type: CAZyme
Location: 22080 - 23138 (-)
Gene ID: k141_54946_19
Type: TC
Location: 23493 - 24506 (-)
Gene ID: k141_54946_20
Type: TF
Location: 24642 - 25535 (+)
Gene ID: k141_54946_21
Type: pfam
Location: 25854 - 28028 (-)
Gene ID: k141_54946_22
Type: TC
Location: 28033 - 29391 (-)
Gene ID: k141_54946_23
Type: pfam
Location: 29552 - 30826 (+)
Gene ID: k141_54946_24
Type: STP
Location: 31066 - 31758 (-)
Gene ID: k141_54946_25
Type: CAZyme
Location: 31783 - 34554 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_54946_22 vegetarian > omnivore 2.01784 0.04850

🧭 Explore Read Mapping of CGC

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