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Cluster: AG444_bin.46_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50277 k141_50277_24 27905 28243 - 4.A.3.1.2
TF k141_50277 k141_50277_25 28458 29462 - LacI
TC k141_50277 k141_50277_26 29820 31595 + 4.A.3.1.1
CAZyme k141_50277 k141_50277_27 31662 33101 + GH1
TF k141_50277 k141_50277_28 33369 34406 - LacI
CAZyme k141_50277 k141_50277_29 34748 36190 + GH1
TC k141_50277 k141_50277_30 36367 38127 + 4.A.3.1.1
TF k141_50277 k141_50277_31 38304 39305 - LacI
TC k141_50277 k141_50277_32 39590 41347 + 4.A.3.1.1
CAZyme k141_50277 k141_50277_33 41423 42844 + GH1
Gene ID: k141_50277_24
Type: TC
Location: 27905 - 28243 (-)
Gene ID: k141_50277_25
Type: TF
Location: 28458 - 29462 (-)
Gene ID: k141_50277_26
Type: TC
Location: 29820 - 31595 (+)
Gene ID: k141_50277_27
Type: CAZyme
Location: 31662 - 33101 (+)
Gene ID: k141_50277_28
Type: TF
Location: 33369 - 34406 (-)
Gene ID: k141_50277_29
Type: CAZyme
Location: 34748 - 36190 (+)
Gene ID: k141_50277_30
Type: TC
Location: 36367 - 38127 (+)
Gene ID: k141_50277_31
Type: TF
Location: 38304 - 39305 (-)
Gene ID: k141_50277_32
Type: TC
Location: 39590 - 41347 (+)
Gene ID: k141_50277_33
Type: CAZyme
Location: 41423 - 42844 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_50277_28 vegetarian > omnivore 1.04246 0.02677

🧭 Explore Read Mapping of CGC

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