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Cluster: AG444_bin.3_CGC65

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_113255 k141_113255_43 42623 44023 - GH1
CAZyme k141_113255 k141_113255_44 44074 46266 - CBM35 | GH5_41
pfam k141_113255 k141_113255_45 46279 47616 - LamB
TC k141_113255 k141_113255_46 47879 49150 - 4.A.3.2.6
TC k141_113255 k141_113255_47 49328 49642 + 4.A.3.2.6
TC k141_113255 k141_113255_48 49652 50974 + 4.A.3.2.6
TC k141_113255 k141_113255_49 50998 51312 + 4.A.3.2.7
pfam k141_113255 k141_113255_50 51362 52276 + ROK
TF k141_113255 k141_113255_51 52393 53295 + LacI
TC k141_113255 k141_113255_52 53474 54391 + 3.A.1.15.7
TC k141_113255 k141_113255_53 54388 55209 + 3.A.1.15.7
TC k141_113255 k141_113255_54 55206 56054 + 3.A.1.15.7
TC k141_113255 k141_113255_55 56048 56902 + 3.A.1.15.7
pfam k141_113255 k141_113255_56 56969 57364 - YgbA_NO
TF k141_113255 k141_113255_57 57377 58264 - HTH_1
TC k141_113255 k141_113255_58 58448 59389 + 2.A.69.3.5
pfam k141_113255 k141_113255_59 59425 61134 + TPP_enzyme_M | TPP_enzyme_C | TPP_enzyme_N
pfam k141_113255 k141_113255_60 61174 61467 - Rdx
TC k141_113255 k141_113255_61 61683 64046 + 1.B.14.2.7
pfam k141_113255 k141_113255_62 64118 65149 + HemS | HemS | ChuX_HutX | ChuX_HutX
TC k141_113255 k141_113255_63 65146 65964 + 3.A.1.14.16
TC k141_113255 k141_113255_64 65964 66959 + 3.A.1.14.5
TC k141_113255 k141_113255_65 66952 67731 + 3.A.1.14.16
Gene ID: k141_113255_43
Type: CAZyme
Location: 42623 - 44023 (-)
Gene ID: k141_113255_44
Type: CAZyme
Location: 44074 - 46266 (-)
Gene ID: k141_113255_45
Type: pfam
Location: 46279 - 47616 (-)
Gene ID: k141_113255_46
Type: TC
Location: 47879 - 49150 (-)
Gene ID: k141_113255_47
Type: TC
Location: 49328 - 49642 (+)
Gene ID: k141_113255_48
Type: TC
Location: 49652 - 50974 (+)
Gene ID: k141_113255_49
Type: TC
Location: 50998 - 51312 (+)
Gene ID: k141_113255_50
Type: pfam
Location: 51362 - 52276 (+)
Gene ID: k141_113255_51
Type: TF
Location: 52393 - 53295 (+)
Gene ID: k141_113255_52
Type: TC
Location: 53474 - 54391 (+)
Gene ID: k141_113255_53
Type: TC
Location: 54388 - 55209 (+)
Gene ID: k141_113255_54
Type: TC
Location: 55206 - 56054 (+)
Gene ID: k141_113255_55
Type: TC
Location: 56048 - 56902 (+)
Gene ID: k141_113255_56
Type: pfam
Location: 56969 - 57364 (-)
Gene ID: k141_113255_57
Type: TF
Location: 57377 - 58264 (-)
Gene ID: k141_113255_58
Type: TC
Location: 58448 - 59389 (+)
Gene ID: k141_113255_59
Type: pfam
Location: 59425 - 61134 (+)
Gene ID: k141_113255_60
Type: pfam
Location: 61174 - 61467 (-)
Gene ID: k141_113255_61
Type: TC
Location: 61683 - 64046 (+)
Gene ID: k141_113255_62
Type: pfam
Location: 64118 - 65149 (+)
Gene ID: k141_113255_63
Type: TC
Location: 65146 - 65964 (+)
Gene ID: k141_113255_64
Type: TC
Location: 65964 - 66959 (+)
Gene ID: k141_113255_65
Type: TC
Location: 66952 - 67731 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_113255_53 vegetarian > omnivore 1.07998 0.03860

🧭 Explore Read Mapping of CGC

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