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Cluster: AG444_bin.3_CGC62

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_168281 k141_168281_2 1435 2862 + 2.A.1.3.38
TC k141_168281 k141_168281_3 2933 4177 + 1.A.23.4.5
TF k141_168281 k141_168281_4 4181 5161 - LacI
NULL(UNKNOWN) k141_168281 k141_168281_5 5410 5826 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_168281 k141_168281_6 5846 6997 - GH179
pfam k141_168281 k141_168281_7 6999 8021 - AP_endonuc_2
TC k141_168281 k141_168281_8 8038 9279 - 2.A.1.10.4
TC k141_168281 k141_168281_9 9431 10807 - 2.A.3.1.1
TC k141_168281 k141_168281_10 10915 13113 - 1.B.14.1.15
Gene ID: k141_168281_2
Type: TC
Location: 1435 - 2862 (+)
Gene ID: k141_168281_3
Type: TC
Location: 2933 - 4177 (+)
Gene ID: k141_168281_4
Type: TF
Location: 4181 - 5161 (-)
Gene ID: k141_168281_5
Type:
Location: 5410 - 5826 (+)
Gene ID: k141_168281_6
Type: CAZyme
Location: 5846 - 6997 (-)
Gene ID: k141_168281_7
Type: pfam
Location: 6999 - 8021 (-)
Gene ID: k141_168281_8
Type: TC
Location: 8038 - 9279 (-)
Gene ID: k141_168281_9
Type: TC
Location: 9431 - 10807 (-)
Gene ID: k141_168281_10
Type: TC
Location: 10915 - 13113 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_168281_4 vegetarian > omnivore 2.27771 0.02714
k141_168281_4 vegetarian > vegan 1.53298 0.02809
k141_168281_8 vegetarian > omnivore 1.19924 0.02921

🧭 Explore Read Mapping of CGC

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