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Cluster: AG444_bin.3_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_123179 k141_123179_4 5942 6955 + GH177
pfam k141_123179 k141_123179_5 6997 7881 + AP_endonuc_2
pfam k141_123179 k141_123179_6 7905 8804 + AP_endonuc_2
TC k141_123179 k141_123179_7 8948 10258 - 3.A.1.1.3
TC k141_123179 k141_123179_8 10251 11324 - 3.A.1.1.3
pfam k141_123179 k141_123179_9 11330 12154 - Metallophos | Metallophos_2
TC k141_123179 k141_123179_10 12165 13052 - 3.A.1.1.18
TC k141_123179 k141_123179_11 13042 13914 - 3.A.1.1.11
pfam k141_123179 k141_123179_12 14057 15076 - ADH_zinc_N | AlaDh_PNT_C | ADH_N | ADH_zinc_N_2
TC k141_123179 k141_123179_13 15373 16656 - 2.A.53.3.8
TC k141_123179 k141_123179_14 16653 17333 - 2.A.53.3.8
Gene ID: k141_123179_4
Type: CAZyme
Location: 5942 - 6955 (+)
Gene ID: k141_123179_5
Type: pfam
Location: 6997 - 7881 (+)
Gene ID: k141_123179_6
Type: pfam
Location: 7905 - 8804 (+)
Gene ID: k141_123179_7
Type: TC
Location: 8948 - 10258 (-)
Gene ID: k141_123179_8
Type: TC
Location: 10251 - 11324 (-)
Gene ID: k141_123179_9
Type: pfam
Location: 11330 - 12154 (-)
Gene ID: k141_123179_10
Type: TC
Location: 12165 - 13052 (-)
Gene ID: k141_123179_11
Type: TC
Location: 13042 - 13914 (-)
Gene ID: k141_123179_12
Type: pfam
Location: 14057 - 15076 (-)
Gene ID: k141_123179_13
Type: TC
Location: 15373 - 16656 (-)
Gene ID: k141_123179_14
Type: TC
Location: 16653 - 17333 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_123179_5 vegan > omnivore 1.87067 0.02415
k141_123179_5 vegetarian > omnivore 1.83372 0.02921
k141_123179_6 vegetarian > omnivore 1.72112 0.02921
k141_123179_6 vegetarian > vegan 2.31411 0.01287

🧭 Explore Read Mapping of CGC

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