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Cluster: AG444_bin.3_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_66441 k141_66441_77 77205 78422 + 2.A.1.36.2
pfam k141_66441 k141_66441_78 78580 79581 + A_deaminase
CAZyme k141_66441 k141_66441_79 79617 80657 - GH109
CAZyme k141_66441 k141_66441_80 81101 82471 + GH1
TF k141_66441 k141_66441_81 82688 82903 + HHA
pfam k141_66441 k141_66441_82 82979 83419 + DUF2569
TC k141_66441 k141_66441_83 83498 84079 + 3.D.6.1.4
TC k141_66441 k141_66441_84 84079 84657 + 3.D.6.1.4
TC k141_66441 k141_66441_85 84650 86707 + 3.D.6.1.4
TC k141_66441 k141_66441_86 86708 87760 + 3.D.6.1.4
TC k141_66441 k141_66441_87 87768 88391 + 3.D.6.1.4
TC k141_66441 k141_66441_88 88394 89092 + 3.D.6.1.4
STP k141_66441 k141_66441_89 89094 89729 + HhH-GPD
NULL(UNKNOWN) k141_66441 k141_66441_90 90006 90146 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_66441 k141_66441_91 90337 91842 + 2.A.17.1.2
Gene ID: k141_66441_77
Type: TC
Location: 77205 - 78422 (+)
Gene ID: k141_66441_78
Type: pfam
Location: 78580 - 79581 (+)
Gene ID: k141_66441_79
Type: CAZyme
Location: 79617 - 80657 (-)
Gene ID: k141_66441_80
Type: CAZyme
Location: 81101 - 82471 (+)
Gene ID: k141_66441_81
Type: TF
Location: 82688 - 82903 (+)
Gene ID: k141_66441_82
Type: pfam
Location: 82979 - 83419 (+)
Gene ID: k141_66441_83
Type: TC
Location: 83498 - 84079 (+)
Gene ID: k141_66441_84
Type: TC
Location: 84079 - 84657 (+)
Gene ID: k141_66441_85
Type: TC
Location: 84650 - 86707 (+)
Gene ID: k141_66441_86
Type: TC
Location: 86708 - 87760 (+)
Gene ID: k141_66441_87
Type: TC
Location: 87768 - 88391 (+)
Gene ID: k141_66441_88
Type: TC
Location: 88394 - 89092 (+)
Gene ID: k141_66441_89
Type: STP
Location: 89094 - 89729 (+)
Gene ID: k141_66441_90
Type:
Location: 90006 - 90146 (-)
Gene ID: k141_66441_91
Type: TC
Location: 90337 - 91842 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_66441_84 vegetarian > vegan 1.62971 0.01287
k141_66441_86 vegetarian > vegan 2.03475 0.02809

🧭 Explore Read Mapping of CGC

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