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Cluster: AG444_bin.3_CGC39

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_140835 k141_140835_17 19219 19599 + 1.A.77.3.8
TC k141_140835 k141_140835_18 19607 20422 + 3.A.2.1.1
TC k141_140835 k141_140835_19 20472 20711 + 3.A.2.1.1
TC k141_140835 k141_140835_20 20762 21232 + 3.A.2.1.1
TC k141_140835 k141_140835_21 21247 21780 + 3.A.2.1.1
TC k141_140835 k141_140835_22 21793 23334 + 3.A.2.1.1
TC k141_140835 k141_140835_23 23385 24248 + 3.A.2.1.1
TC k141_140835 k141_140835_24 24275 25657 + 3.A.2.1.1
TC k141_140835 k141_140835_25 25678 26097 + 3.A.2.1.1
pfam k141_140835 k141_140835_26 26794 28164 + Hexapep | Hexapep | NTP_transferase | IspD | NTP_transf_3 | Hexapep_2
STP k141_140835 k141_140835_27 28348 30177 + SIS | SIS
TC k141_140835 k141_140835_28 30514 31554 + 3.A.1.7.1
TC k141_140835 k141_140835_29 31683 32642 + 3.A.1.7.1
TC k141_140835 k141_140835_30 32642 33532 + 3.A.1.7.1
TC k141_140835 k141_140835_31 33580 34353 + 3.A.1.7.1
pfam k141_140835 k141_140835_32 34404 35129 + PhoU | PhoU
TC k141_140835 k141_140835_33 35607 37241 + 1.B.3.1.3
CAZyme k141_140835 k141_140835_34 37280 38446 + CE1
pfam k141_140835 k141_140835_35 38496 39215 + Glucosamine_iso
pfam k141_140835 k141_140835_36 39295 39960 - Hydrolase | HAD_2
TC k141_140835 k141_140835_37 40130 41467 + 2.A.40.7.6
Gene ID: k141_140835_17
Type: TC
Location: 19219 - 19599 (+)
Gene ID: k141_140835_18
Type: TC
Location: 19607 - 20422 (+)
Gene ID: k141_140835_19
Type: TC
Location: 20472 - 20711 (+)
Gene ID: k141_140835_20
Type: TC
Location: 20762 - 21232 (+)
Gene ID: k141_140835_21
Type: TC
Location: 21247 - 21780 (+)
Gene ID: k141_140835_22
Type: TC
Location: 21793 - 23334 (+)
Gene ID: k141_140835_23
Type: TC
Location: 23385 - 24248 (+)
Gene ID: k141_140835_24
Type: TC
Location: 24275 - 25657 (+)
Gene ID: k141_140835_25
Type: TC
Location: 25678 - 26097 (+)
Gene ID: k141_140835_26
Type: pfam
Location: 26794 - 28164 (+)
Gene ID: k141_140835_27
Type: STP
Location: 28348 - 30177 (+)
Gene ID: k141_140835_28
Type: TC
Location: 30514 - 31554 (+)
Gene ID: k141_140835_29
Type: TC
Location: 31683 - 32642 (+)
Gene ID: k141_140835_30
Type: TC
Location: 32642 - 33532 (+)
Gene ID: k141_140835_31
Type: TC
Location: 33580 - 34353 (+)
Gene ID: k141_140835_32
Type: pfam
Location: 34404 - 35129 (+)
Gene ID: k141_140835_33
Type: TC
Location: 35607 - 37241 (+)
Gene ID: k141_140835_34
Type: CAZyme
Location: 37280 - 38446 (+)
Gene ID: k141_140835_35
Type: pfam
Location: 38496 - 39215 (+)
Gene ID: k141_140835_36
Type: pfam
Location: 39295 - 39960 (-)
Gene ID: k141_140835_37
Type: TC
Location: 40130 - 41467 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_140835_31 vegetarian > omnivore 1.35500 0.03860

🧭 Explore Read Mapping of CGC

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