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Cluster: AG444_bin.3_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_38433 k141_38433_2 556 858 - 4.A.3.2.6
TC k141_38433 k141_38433_3 956 2278 - 4.A.3.2.6
TC k141_38433 k141_38433_4 2290 2604 - 4.A.3.2.6
TF k141_38433 k141_38433_5 2895 3839 + LacI
TC k141_38433 k141_38433_6 4051 5421 + 2.A.1.15.1
pfam k141_38433 k141_38433_7 5435 6697 + LigB | LigA
TF k141_38433 k141_38433_8 6694 7920 - HTH_1 | HTH_1
CAZyme k141_38433 k141_38433_9 8048 8788 + CE14
Gene ID: k141_38433_2
Type: TC
Location: 556 - 858 (-)
Gene ID: k141_38433_3
Type: TC
Location: 956 - 2278 (-)
Gene ID: k141_38433_4
Type: TC
Location: 2290 - 2604 (-)
Gene ID: k141_38433_5
Type: TF
Location: 2895 - 3839 (+)
Gene ID: k141_38433_6
Type: TC
Location: 4051 - 5421 (+)
Gene ID: k141_38433_7
Type: pfam
Location: 5435 - 6697 (+)
Gene ID: k141_38433_8
Type: TF
Location: 6694 - 7920 (-)
Gene ID: k141_38433_9
Type: CAZyme
Location: 8048 - 8788 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_38433_2 vegetarian > omnivore 1.92581 0.03860
k141_38433_3 vegetarian > omnivore 1.70010 0.02921
k141_38433_3 vegetarian > vegan 1.39430 0.02809

🧭 Explore Read Mapping of CGC

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