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Cluster: AG444_bin.3_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_25920 k141_25920_3 2798 3721 + 3.A.1.2.15
TC k141_25920 k141_25920_4 3754 5238 + 3.A.1.2.3
TC k141_25920 k141_25920_5 5249 6280 + 3.A.1.2.15
NULL(UNKNOWN) k141_25920 k141_25920_6 6464 7105 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_25920 k141_25920_7 7121 8125 - LacI
CAZyme k141_25920 k141_25920_8 8155 9555 - GH32
TC k141_25920 k141_25920_9 9555 10925 - 4.A.1.2.1
TC k141_25920 k141_25920_10 11030 12547 - 1.B.3.1.2
STP k141_25920 k141_25920_11 12712 13635 - PfkB
pfam k141_25920 k141_25920_12 13748 14515 + HTH_46
TC k141_25920 k141_25920_13 14651 14995 + 9.B.32.1.3
TC k141_25920 k141_25920_14 14995 16137 + 8.A.1.1.4
TC k141_25920 k141_25920_15 16177 16974 - 3.A.1.14.3
TC k141_25920 k141_25920_16 16971 18053 - 3.A.1.14.5
Gene ID: k141_25920_3
Type: TC
Location: 2798 - 3721 (+)
Gene ID: k141_25920_4
Type: TC
Location: 3754 - 5238 (+)
Gene ID: k141_25920_5
Type: TC
Location: 5249 - 6280 (+)
Gene ID: k141_25920_6
Type:
Location: 6464 - 7105 (+)
Gene ID: k141_25920_7
Type: TF
Location: 7121 - 8125 (-)
Gene ID: k141_25920_8
Type: CAZyme
Location: 8155 - 9555 (-)
Gene ID: k141_25920_9
Type: TC
Location: 9555 - 10925 (-)
Gene ID: k141_25920_10
Type: TC
Location: 11030 - 12547 (-)
Gene ID: k141_25920_11
Type: STP
Location: 12712 - 13635 (-)
Gene ID: k141_25920_12
Type: pfam
Location: 13748 - 14515 (+)
Gene ID: k141_25920_13
Type: TC
Location: 14651 - 14995 (+)
Gene ID: k141_25920_14
Type: TC
Location: 14995 - 16137 (+)
Gene ID: k141_25920_15
Type: TC
Location: 16177 - 16974 (-)
Gene ID: k141_25920_16
Type: TC
Location: 16971 - 18053 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_25920_8 vegetarian > vegan 2.30699 0.01287

🧭 Explore Read Mapping of CGC

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