dbCAN Logo

Cluster: AG444_bin.3_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109374 k141_109374_112 118395 120605 + 3.A.3.6.2
pfam k141_109374 k141_109374_113 120709 120954 - TusA
TC k141_109374 k141_109374_114 121161 121826 + 2.A.88.8.6
pfam k141_109374 k141_109374_115 121900 122457 + DcrB
TC k141_109374 k141_109374_116 122458 123678 - 2.A.1.46.7
TC k141_109374 k141_109374_117 123812 124861 + 2.A.86.1.2
TC k141_109374 k141_109374_118 124858 125238 - 2.A.7.22.1
TC k141_109374 k141_109374_119 125238 125576 - 2.A.7.22.2
CAZyme k141_109374 k141_109374_120 125573 127228 - GT83
pfam k141_109374 k141_109374_121 127228 128130 - Polysacc_deac_1
pfam k141_109374 k141_109374_122 128127 130112 - Formyl_trans_N | 3Beta_HSD | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_109374 k141_109374_123 130109 131092 - GT2
Gene ID: k141_109374_112
Type: TC
Location: 118395 - 120605 (+)
Gene ID: k141_109374_113
Type: pfam
Location: 120709 - 120954 (-)
Gene ID: k141_109374_114
Type: TC
Location: 121161 - 121826 (+)
Gene ID: k141_109374_115
Type: pfam
Location: 121900 - 122457 (+)
Gene ID: k141_109374_116
Type: TC
Location: 122458 - 123678 (-)
Gene ID: k141_109374_117
Type: TC
Location: 123812 - 124861 (+)
Gene ID: k141_109374_118
Type: TC
Location: 124858 - 125238 (-)
Gene ID: k141_109374_119
Type: TC
Location: 125238 - 125576 (-)
Gene ID: k141_109374_120
Type: CAZyme
Location: 125573 - 127228 (-)
Gene ID: k141_109374_121
Type: pfam
Location: 127228 - 128130 (-)
Gene ID: k141_109374_122
Type: pfam
Location: 128127 - 130112 (-)
Gene ID: k141_109374_123
Type: CAZyme
Location: 130109 - 131092 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_109374_113 vegetarian > vegan 1.01950 0.02809
k141_109374_117 vegetarian > vegan 1.59139 0.02809
k141_109374_120 vegetarian > vegan 1.59241 0.02809

🧭 Explore Read Mapping of CGC

← Back to Cluster List