dbCAN Logo

Cluster: AG444_bin.3_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_109098 k141_109098_5 4054 5049 + 9.B.97.1.1
TC k141_109098 k141_109098_6 5076 5519 - 9.B.44.1.1
TC k141_109098 k141_109098_7 5554 5925 - 9.B.44.1.1
pfam k141_109098 k141_109098_8 6094 7548 - FGGY_N | FGGY_C
NULL(UNKNOWN) k141_109098 k141_109098_9 7641 8963 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_109098 k141_109098_10 9458 10453 + 3.A.1.2.4
TC k141_109098 k141_109098_11 10518 12059 + 3.A.1.2.4
TC k141_109098 k141_109098_12 12037 13218 + 3.A.1.2.4
TF k141_109098 k141_109098_13 13451 14629 + HTH_AraC | HTH_AraC
CAZyme k141_109098 k141_109098_14 14668 15231 - GH73
CAZyme k141_109098 k141_109098_15 15801 17834 + GH13_19
STP k141_109098 k141_109098_16 18005 19261 + Aminotran_1_2
TC k141_109098 k141_109098_17 19304 19789 - 5.A.3.11.1
Gene ID: k141_109098_5
Type: TC
Location: 4054 - 5049 (+)
Gene ID: k141_109098_6
Type: TC
Location: 5076 - 5519 (-)
Gene ID: k141_109098_7
Type: TC
Location: 5554 - 5925 (-)
Gene ID: k141_109098_8
Type: pfam
Location: 6094 - 7548 (-)
Gene ID: k141_109098_9
Type:
Location: 7641 - 8963 (-)
Gene ID: k141_109098_10
Type: TC
Location: 9458 - 10453 (+)
Gene ID: k141_109098_11
Type: TC
Location: 10518 - 12059 (+)
Gene ID: k141_109098_12
Type: TC
Location: 12037 - 13218 (+)
Gene ID: k141_109098_13
Type: TF
Location: 13451 - 14629 (+)
Gene ID: k141_109098_14
Type: CAZyme
Location: 14668 - 15231 (-)
Gene ID: k141_109098_15
Type: CAZyme
Location: 15801 - 17834 (+)
Gene ID: k141_109098_16
Type: STP
Location: 18005 - 19261 (+)
Gene ID: k141_109098_17
Type: TC
Location: 19304 - 19789 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_109098_8 vegetarian > vegan 1.57930 0.02809
k141_109098_12 vegetarian > omnivore 1.39478 0.02921
k141_109098_13 vegetarian > omnivore 1.85725 0.02921
k141_109098_13 vegetarian > vegan 1.05453 0.02809

🧭 Explore Read Mapping of CGC

← Back to Cluster List