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Cluster: AG443_bin.92_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_62705 k141_62705_83 88578 90266 - 3.A.1.120.6
CAZyme k141_62705 k141_62705_84 90500 91942 + GH13_5
CAZyme k141_62705 k141_62705_85 91971 93647 + GH13_31
TC k141_62705 k141_62705_86 93933 95657 + 3.A.1.135.5
TC k141_62705 k141_62705_87 95660 97426 + 3.A.1.135.5
pfam k141_62705 k141_62705_88 97717 100698 + Mrr_cat
STP k141_62705 k141_62705_89 100679 101491 - PIG-L
CAZyme k141_62705 k141_62705_90 101478 103850 - GT4
Gene ID: k141_62705_83
Type: TC
Location: 88578 - 90266 (-)
Gene ID: k141_62705_84
Type: CAZyme
Location: 90500 - 91942 (+)
Gene ID: k141_62705_85
Type: CAZyme
Location: 91971 - 93647 (+)
Gene ID: k141_62705_86
Type: TC
Location: 93933 - 95657 (+)
Gene ID: k141_62705_87
Type: TC
Location: 95660 - 97426 (+)
Gene ID: k141_62705_88
Type: pfam
Location: 97717 - 100698 (+)
Gene ID: k141_62705_89
Type: STP
Location: 100679 - 101491 (-)
Gene ID: k141_62705_90
Type: CAZyme
Location: 101478 - 103850 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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