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Cluster: AG443_bin.92_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_295131 k141_295131_21 24460 26829 - GH92
CAZyme k141_295131 k141_295131_22 26850 28019 - GH76
CAZyme k141_295131 k141_295131_23 28290 29507 - GH76
pfam k141_295131 k141_295131_24 29662 30828 - SusE
TC k141_295131 k141_295131_25 30935 32533 - 8.A.46.1.3
TC k141_295131 k141_295131_26 32546 35617 - 1.B.14.6.1
pfam k141_295131 k141_295131_27 35966 36865 + ROK | ROK
NULL(UNKNOWN) k141_295131 k141_295131_28 36876 38642 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_295131 k141_295131_29 38748 39899 + 2.A.1.7.16
Gene ID: k141_295131_21
Type: CAZyme
Location: 24460 - 26829 (-)
Gene ID: k141_295131_22
Type: CAZyme
Location: 26850 - 28019 (-)
Gene ID: k141_295131_23
Type: CAZyme
Location: 28290 - 29507 (-)
Gene ID: k141_295131_24
Type: pfam
Location: 29662 - 30828 (-)
Gene ID: k141_295131_25
Type: TC
Location: 30935 - 32533 (-)
Gene ID: k141_295131_26
Type: TC
Location: 32546 - 35617 (-)
Gene ID: k141_295131_27
Type: pfam
Location: 35966 - 36865 (+)
Gene ID: k141_295131_28
Type:
Location: 36876 - 38642 (+)
Gene ID: k141_295131_29
Type: TC
Location: 38748 - 39899 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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