Cluster: AG437_55_CGC2
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 6
- Substrate:
- Genome ID: AG437_55
- CGC Family ID: CGCFAM_00034
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_163944 | k141_163944_7 | 10833 | 12176 | - | 2.A.62.1.3 |
| pfam | k141_163944 | k141_163944_8 | 13388 | 14872 | + | FGGY_N | FGGY_C |
| pfam | k141_163944 | k141_163944_9 | 15050 | 16306 | + | RhaA |
| TC | k141_163944 | k141_163944_10 | 16432 | 17466 | + | 2.A.7.6.1 |
| CAZyme | k141_163944 | k141_163944_11 | 17574 | 19499 | - | GH13_46 |
| CAZyme | k141_163944 | k141_163944_12 | 19588 | 21540 | - | GH13_14 |
| CAZyme | k141_163944 | k141_163944_13 | 21562 | 23706 | - | GH97 |
| CAZyme | k141_163944 | k141_163944_14 | 23730 | 26408 | - | CBM20 | GH77 |
| TC | k141_163944 | k141_163944_15 | 26507 | 27823 | - | 2.A.2.6.2 |
| TF | k141_163944 | k141_163944_16 | 28049 | 29086 | - | LacI |
| NULL(UNKNOWN) | k141_163944 | k141_163944_17 | 29211 | 29660 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_163944 | k141_163944_18 | 30305 | 33352 | + | 1.B.14.6.1 |
| TC | k141_163944 | k141_163944_19 | 33377 | 35047 | + | 8.A.46.1.1 |
| pfam | k141_163944 | k141_163944_20 | 35069 | 36274 | + | SusE | SusF_SusE |
| NULL(UNKNOWN) | k141_163944 | k141_163944_21 | 36295 | 37692 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_163944 | k141_163944_22 | 37983 | 39977 | + | GH13_6 |
| CAZyme | k141_163944 | k141_163944_23 | 39988 | 41259 | + | GH53 |
Gene ID: k141_163944_7
Type: TC
Location: 10833 - 12176 (-)
Type: TC
Location: 10833 - 12176 (-)
Gene ID: k141_163944_8
Type: pfam
Location: 13388 - 14872 (+)
Type: pfam
Location: 13388 - 14872 (+)
Gene ID: k141_163944_9
Type: pfam
Location: 15050 - 16306 (+)
Type: pfam
Location: 15050 - 16306 (+)
Gene ID: k141_163944_10
Type: TC
Location: 16432 - 17466 (+)
Type: TC
Location: 16432 - 17466 (+)
Gene ID: k141_163944_11
Type: CAZyme
Location: 17574 - 19499 (-)
Type: CAZyme
Location: 17574 - 19499 (-)
Gene ID: k141_163944_12
Type: CAZyme
Location: 19588 - 21540 (-)
Type: CAZyme
Location: 19588 - 21540 (-)
Gene ID: k141_163944_13
Type: CAZyme
Location: 21562 - 23706 (-)
Type: CAZyme
Location: 21562 - 23706 (-)
Gene ID: k141_163944_14
Type: CAZyme
Location: 23730 - 26408 (-)
Type: CAZyme
Location: 23730 - 26408 (-)
Gene ID: k141_163944_15
Type: TC
Location: 26507 - 27823 (-)
Type: TC
Location: 26507 - 27823 (-)
Gene ID: k141_163944_16
Type: TF
Location: 28049 - 29086 (-)
Type: TF
Location: 28049 - 29086 (-)
Gene ID: k141_163944_17
Type:
Location: 29211 - 29660 (+)
Type:
Location: 29211 - 29660 (+)
Gene ID: k141_163944_18
Type: TC
Location: 30305 - 33352 (+)
Type: TC
Location: 30305 - 33352 (+)
Gene ID: k141_163944_19
Type: TC
Location: 33377 - 35047 (+)
Type: TC
Location: 33377 - 35047 (+)
Gene ID: k141_163944_20
Type: pfam
Location: 35069 - 36274 (+)
Type: pfam
Location: 35069 - 36274 (+)
Gene ID: k141_163944_21
Type:
Location: 36295 - 37692 (+)
Type:
Location: 36295 - 37692 (+)
Gene ID: k141_163944_22
Type: CAZyme
Location: 37983 - 39977 (+)
Type: CAZyme
Location: 37983 - 39977 (+)
Gene ID: k141_163944_23
Type: CAZyme
Location: 39988 - 41259 (+)
Type: CAZyme
Location: 39988 - 41259 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp017483185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.