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Cluster: AG437_55_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_166286 k141_166286_12 25278 29867 + PL11_2
CAZyme k141_166286 k141_166286_13 30036 32195 + PL11
CAZyme k141_166286 k141_166286_14 32314 33735 - GH28
CAZyme k141_166286 k141_166286_15 33788 35101 - GH28
CAZyme k141_166286 k141_166286_16 35198 36574 - CE20
CAZyme k141_166286 k141_166286_17 36621 39284 - CBM67 | GH78
CAZyme k141_166286 k141_166286_18 39311 40891 - GH27
TF k141_166286 k141_166286_19 42199 46512 + HTH_AraC
pfam k141_166286 k141_166286_20 46596 47537 - Metallophos
TC k141_166286 k141_166286_21 47597 50449 - 1.B.14.12.2
Gene ID: k141_166286_12
Type: CAZyme
Location: 25278 - 29867 (+)
Gene ID: k141_166286_13
Type: CAZyme
Location: 30036 - 32195 (+)
Gene ID: k141_166286_14
Type: CAZyme
Location: 32314 - 33735 (-)
Gene ID: k141_166286_15
Type: CAZyme
Location: 33788 - 35101 (-)
Gene ID: k141_166286_16
Type: CAZyme
Location: 35198 - 36574 (-)
Gene ID: k141_166286_17
Type: CAZyme
Location: 36621 - 39284 (-)
Gene ID: k141_166286_18
Type: CAZyme
Location: 39311 - 40891 (-)
Gene ID: k141_166286_19
Type: TF
Location: 42199 - 46512 (+)
Gene ID: k141_166286_20
Type: pfam
Location: 46596 - 47537 (-)
Gene ID: k141_166286_21
Type: TC
Location: 47597 - 50449 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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