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Cluster: AG437_55_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_218634 k141_218634_1 849 5609 + GH105 | GH28
CAZyme k141_218634 k141_218634_2 5835 7481 + PL1_2
CAZyme k141_218634 k141_218634_3 7574 9376 + PL1_2
CAZyme k141_218634 k141_218634_4 9629 14083 + CE8
NULL(UNKNOWN) k141_218634 k141_218634_5 14165 14449 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_218634 k141_218634_6 15532 17628 - PL1_2
pfam k141_218634 k141_218634_7 17970 19631 - DUF5123
pfam k141_218634 k141_218634_8 19650 21626 - SusD_RagB | SusD-like_3
TC k141_218634 k141_218634_9 21674 24925 - 1.B.14.6.1
Gene ID: k141_218634_1
Type: CAZyme
Location: 849 - 5609 (+)
Gene ID: k141_218634_2
Type: CAZyme
Location: 5835 - 7481 (+)
Gene ID: k141_218634_3
Type: CAZyme
Location: 7574 - 9376 (+)
Gene ID: k141_218634_4
Type: CAZyme
Location: 9629 - 14083 (+)
Gene ID: k141_218634_5
Type:
Location: 14165 - 14449 (-)
Gene ID: k141_218634_6
Type: CAZyme
Location: 15532 - 17628 (-)
Gene ID: k141_218634_7
Type: pfam
Location: 17970 - 19631 (-)
Gene ID: k141_218634_8
Type: pfam
Location: 19650 - 21626 (-)
Gene ID: k141_218634_9
Type: TC
Location: 21674 - 24925 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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