Cluster: AG433_bin.18_sub_CGC15
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: AG433_bin.18_sub
- Continent: Africa
- Source Study: Maghini et al., 2025 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_117974 | k141_117974_16 | 15754 | 16197 | + | 4.A.6.1.16 |
| pfam | k141_117974 | k141_117974_17 | 16197 | 16478 | + | YajC |
| TC | k141_117974 | k141_117974_18 | 16515 | 16997 | + | 4.A.6.1.4 |
| TC | k141_117974 | k141_117974_19 | 17088 | 17888 | + | 4.A.6.1.4 |
| TC | k141_117974 | k141_117974_20 | 17878 | 18960 | + | 4.A.6.1.4 |
| TF | k141_117974 | k141_117974_21 | 19145 | 19876 | + | GntR |
| STP | k141_117974 | k141_117974_22 | 19991 | 21157 | + | SIS | SIS |
| CAZyme | k141_117974 | k141_117974_23 | 21276 | 22445 | + | CE9 |
Gene ID: k141_117974_16
Type: TC
Location: 15754 - 16197 (+)
Type: TC
Location: 15754 - 16197 (+)
Gene ID: k141_117974_17
Type: pfam
Location: 16197 - 16478 (+)
Type: pfam
Location: 16197 - 16478 (+)
Gene ID: k141_117974_18
Type: TC
Location: 16515 - 16997 (+)
Type: TC
Location: 16515 - 16997 (+)
Gene ID: k141_117974_19
Type: TC
Location: 17088 - 17888 (+)
Type: TC
Location: 17088 - 17888 (+)
Gene ID: k141_117974_20
Type: TC
Location: 17878 - 18960 (+)
Type: TC
Location: 17878 - 18960 (+)
Gene ID: k141_117974_21
Type: TF
Location: 19145 - 19876 (+)
Type: TF
Location: 19145 - 19876 (+)
Gene ID: k141_117974_22
Type: STP
Location: 19991 - 21157 (+)
Type: STP
Location: 19991 - 21157 (+)
Gene ID: k141_117974_23
Type: CAZyme
Location: 21276 - 22445 (+)
Type: CAZyme
Location: 21276 - 22445 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.