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Cluster: AG433_13_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_58276 k141_58276_1 540 2390 + GT2
NULL(UNKNOWN) k141_58276 k141_58276_2 2387 4252 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_58276 k141_58276_3 4577 5563 + GH18
CAZyme k141_58276 k141_58276_4 5636 7474 + CE4
pfam k141_58276 k141_58276_5 8065 9228 + ANF_receptor | Peripla_BP_5 | Peripla_BP_6
TC k141_58276 k141_58276_6 9733 11106 + 2.A.22.5.3
Gene ID: k141_58276_1
Type: CAZyme
Location: 540 - 2390 (+)
Gene ID: k141_58276_2
Type:
Location: 2387 - 4252 (+)
Gene ID: k141_58276_3
Type: CAZyme
Location: 4577 - 5563 (+)
Gene ID: k141_58276_4
Type: CAZyme
Location: 5636 - 7474 (+)
Gene ID: k141_58276_5
Type: pfam
Location: 8065 - 9228 (+)
Gene ID: k141_58276_6
Type: TC
Location: 9733 - 11106 (+)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_58276_5 vegetarian > omnivore 1.73027 0.02923

🧭 Explore Read Mapping of CGC

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