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Cluster: AG433_13_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_237277 k141_237277_1 39 668 - 9.B.149.1.11
TF k141_237277 k141_237277_2 860 1309 - MarR
TC k141_237277 k141_237277_3 1493 2707 + 2.A.27.1.3
pfam k141_237277 k141_237277_4 2912 3292 - HicB_lk_antitox
STP k141_237277 k141_237277_5 3767 5716 - HATPase_c
CAZyme k141_237277 k141_237277_6 5973 6896 + GT51
TF k141_237277 k141_237277_7 7390 8304 - HTH_1
TC k141_237277 k141_237277_8 8481 9887 + 2.A.47.1.13
TC k141_237277 k141_237277_9 10576 11916 - 2.A.13.1.2
Gene ID: k141_237277_1
Type: TC
Location: 39 - 668 (-)
Gene ID: k141_237277_2
Type: TF
Location: 860 - 1309 (-)
Gene ID: k141_237277_3
Type: TC
Location: 1493 - 2707 (+)
Gene ID: k141_237277_4
Type: pfam
Location: 2912 - 3292 (-)
Gene ID: k141_237277_5
Type: STP
Location: 3767 - 5716 (-)
Gene ID: k141_237277_6
Type: CAZyme
Location: 5973 - 6896 (+)
Gene ID: k141_237277_7
Type: TF
Location: 7390 - 8304 (-)
Gene ID: k141_237277_8
Type: TC
Location: 8481 - 9887 (+)
Gene ID: k141_237277_9
Type: TC
Location: 10576 - 11916 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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