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Cluster: AG431_bin.10_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_72478 k141_72478_16 22659 23408 + 9.B.18.1.2
TC k141_72478 k141_72478_17 23450 24094 + 9.B.18.1.3
CAZyme k141_72478 k141_72478_18 24040 25317 + GT4
pfam k141_72478 k141_72478_19 25335 26552 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam k141_72478 k141_72478_20 26631 27686 + Epimerase_2
CAZyme k141_72478 k141_72478_21 27683 28792 + GT4
pfam k141_72478 k141_72478_22 28794 29669 + LicD
NULL(UNKNOWN) k141_72478 k141_72478_23 29653 30207 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_72478 k141_72478_24 30223 30480 + GT2
Gene ID: k141_72478_16
Type: TC
Location: 22659 - 23408 (+)
Gene ID: k141_72478_17
Type: TC
Location: 23450 - 24094 (+)
Gene ID: k141_72478_18
Type: CAZyme
Location: 24040 - 25317 (+)
Gene ID: k141_72478_19
Type: pfam
Location: 25335 - 26552 (+)
Gene ID: k141_72478_20
Type: pfam
Location: 26631 - 27686 (+)
Gene ID: k141_72478_21
Type: CAZyme
Location: 27683 - 28792 (+)
Gene ID: k141_72478_22
Type: pfam
Location: 28794 - 29669 (+)
Gene ID: k141_72478_23
Type:
Location: 29653 - 30207 (+)
Gene ID: k141_72478_24
Type: CAZyme
Location: 30223 - 30480 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_72478_19 vegetarian > omnivore 2.25999 0.04116

🧭 Explore Read Mapping of CGC

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